454 whole genome shotgun sequencing of genomic DNA paired-end library... - SRA

SRX004220: 454 whole genome shotgun sequencing of genomic DNA paired-end library '454-1020' containing sample 'Bacteroides sp. 9_1_42FAA'
1 LS454 (454 GS FLX) run: 5,203 spots, 1.6M bases, 3Mb downloads

UUID: c11efb31-d43c-4830-92b5-bfd85578b406

Design: 454 sequencing of Bacteroides sp. 9_1_42FAA via random selection

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA32445 • SRP001632 • All experiments • All runs

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<B><I>Bacteroides</I> sp. 9_1_42FAA</B>. This strain is from the human gastrointestinal tract. This genome will be used for comparative analysis.

Sample: Generic sample from Bacteroides sp. 9_1_42FAA

SAMN00102930 • SRS002759 • All experiments • All runs

Organism: Bacteroides sp. 9_1_42FAA

Library:

Name: 454-1020

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

5 forward reverse

Experiment attributes: (show all 4 attributes...) (hide...)

gssr_id: 16665.3

lsid: BROAD:SEQUENCING_SAMPLE:16665.3

material_type: Genomic DNA

project: G1329

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2008-04-16 00:09:34.0	454BaseCaller	1.1.03.24

Runs: 1 run, 5,203 spots, 1.6M bases, 3Mb

Run	# of Spots	# of Bases	Size	Published
SRR015659	5,203	1.6M	3Mb	2009-05-13

ID:: 4476

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